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Friedif Calculator

The Friedif value of Flack and Shmueli: how much resonant-scattering contrast a composition offers at a given radiation — the signal an absolute structure determination would have to work with, computed before the crystal is on the diffractometer.

You supply
A chemical formula — brackets and charges included, as on the CHN page — and one or more radiations. It is a property of the composition, so no cell or density is required.
Reading it
80 or more indicates few absolute-structure problems; 34 or lower means difficulty reaching an e.s.d. on the Flack parameter below 0.1. The references below give the thresholds in full.

Worked examples: a nickel complex · an organic cation · C6H5SeCH3 just above the selenium K edge

See also: Absorption Coefficient Calculator · Space Group Reflection Conditions · Refinement Statistics and R Factors

Input

X-ray sources
keV

Either one, not both, and it is added to whatever is ticked above.

Results

Formula as entered C6H5SeCH3
Read as C7H8Se
Friedif(Mo): 711 at 17.445 keV
Friedif(0.97625 Å): 1206 at 12.7 keV
The scattering factors behind it

Mo — 17.445 keV, 0.71073 Å

elementZ ff nearest edge below
C 6 0.0051 0.0016
H 1 0.0000 0.0000
Se 34 -0.0246 2.2229 K at 12.658 keV

0.97625 Å — 12.7 keV, 0.97625 Å

elementZ ff nearest edge below
C 6 0.0089 0.0033
H 1 0.0000 0.0000
Se 34 -4.8005 3.7999 K at 12.658 keV

f′ and f″ are Chantler’s relativistic tabulation (NIST FFAST, J. Phys. Chem. Ref. Data 24 (1995) 71 and 29 (2000) 597); the absorption coefficient is f″ through the optical theorem plus the tabulated scattering term. Compilations of these quantities differ from one another by a few per cent, and that is the accuracy to read them at.

Notes and references
  • What the number is about. Far from an absorption edge an atom’s scattering factor is real, and I(hkl) = I(−hkl) for every structure whether or not it has a centre of symmetry — that is Friedel’s law, and while it holds a diffraction pattern cannot tell a structure from its mirror image. Near an edge the factor becomes complex, f = f0 + f′ + if″, and the imaginary part f″ breaks it: the two members of a Friedel pair come out with measurably different intensities, and that difference — the Bijvoet difference — is the whole of the information an absolute structure is determined from. Friedif scores how much of it a given composition offers at a given wavelength, which is why the answer changes so much between Cu, Mo and Cr for the same formula, and why it can be computed before the crystal is on the diffractometer. The structure factor page builds F without any of this, so everything there obeys Friedel’s law exactly.
  • It is a property of the composition and the radiation, and so an estimate of the signal available rather than a prediction of the outcome. What is actually achieved also depends on resolution, redundancy, the absorption correction, crystal quality, inversion twinning and where the resonant scatterers sit in the cell.
  • This is an implementation of an Excel spreadsheet calculation which was created by Flack and Shmueli; their paper is linked at the foot of this page.
  • A Friedif value of 80 or more indicates few problems in determining the absolute structure. A Friedif value of 34 or lower indicates difficulties to reach an e.s.d. on the Flack parameter less than 0.1. (see H. D. Flack, Acta Chim. Slov., 2008, 55, 689–691.)
  • The quality of an absolute structure determination is often derived from the Flack parameter x along with its associated e.s.d. u, thus x(u). u < 0.04 is associated with a strong inversion-distinguishing power, 0.04 < u < 0.1 means enantiopure-sufficient inversion-distinguishing power. A reliable absolute structure determination requires u < 0.04 and |x| < 2u. If there is a priori biological, chemical, or physical evidence for true enantiopurity of the compound of interest, 0.04 < u < 0.1 and |x| < 2u is also acceptable. These are Flack and Bernardinelli’s criteria; their paper is linked at the foot of this page.

Where this comes from